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Structure of apo KANK1 ankyrin domain

Analyse Structure of apo KANK1 ankyrin domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5YBJ
Type: protein
Length: 248 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Kn motif and ankyrin repeat domain-containing protein 1
UniProt: Q14678

Structure

x-ray diffraction · 1 distinct chain · 57% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Kn motif and ankyrin repeat domain-containing protein 1	protein	248	57% helix, 0% strand	Q14678

Ligands and binding sites

GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5YBJ · Structure of apo KANK1 ankyrin domain · the same entry in another collection · chain A against A, TM-score 1.00
Q14678 · AlphaFold monomer V2.0 prediction for kn motif and ankyrin repeat domain-containing… · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q14678
Elsewhere: RCSB PDB 5YBJ · PDBe 5YBJ · UniProt Q14678

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