Research workbench
Solution structure of HBETA4 extracellular loop of bk potassium channel
Analyse Solution structure of HBETA4 extracellular loop of bk potassium channel in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5Y7L
- Type
- protein
- Length
- 122 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calcium-activated potassium channel subunit beta-4
- UniProt
- Q86W47
- Pockets
- 2 · best druggability 0.39
Structure
solution nmr · 1 distinct chain · 16% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calcium-activated potassium channel subunit beta-4 | protein | 122 | 16% helix, 31% strand | Q86W47 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.39 | 0.81 | 15 | empty |
| 2 | 71 | 0.29 | 0.74 | 20 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 5Y7L · Solution structure of Hbeta4 extracellular loop of BK potassium channel · the same entry in another collection · chain A against A, TM-score 1.00
- Q86W47 · AlphaFold monomer V2.0 prediction for calcium-activated potassium channel subunit beta-4… · a predicted model of the same protein · chain A against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86W47
- Elsewhere: RCSB PDB 5Y7L · PDBe 5Y7L · UniProt Q86W47
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