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Crystal structure of a C-terminal fragment of moorella thermoacetica elongation factor selb

Analyse Crystal structure of a C-terminal fragment of moorella thermoacetica elongation… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1LVA
Type
protein
Length
258 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Selenocysteine-specific elongation factor
UniProt
Q46455
Ligands
Y1, SO4

Structure

x-ray diffraction · 1 distinct chain · 57% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASelenocysteine-specific elongation factorprotein25857% helix, 16% strandQ46455

Ligands and binding sites

  • Y1 · Yttrium ion · metal · 2 copies · chains A
  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 modified (engineered).

Compared structures

  • 1LVA · Crystal structure of a C-terminal fragment of Moorella thermoacetica elongation factor… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q46455 · AlphaFold monomer V2.0 prediction for selenocysteine-specific elongation factor (Q46455) · a predicted model of the same protein · chain A against A, TM-score 0.76

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