Research workbench

C-terminal zinc finger of ring finger protein 141

Analyse C-terminal zinc finger of ring finger protein 141 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5XEK
Type: protein
Length: 42 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ring finger protein 141
UniProt: Q8WVD5
Ligands: ZN
Pockets: 1 · best druggability 0.37

Structure

solution nmr · 1 distinct chain · 19% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ring finger protein 141	protein	42	19% helix, 5% strand	Q8WVD5

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.37	0.78	14	empty

Compared structures

5XEK · C-terminal zinc finger of RING finger protein 141 · the same entry in another collection · chain A against A, TM-score 1.00
Q8WVD5 · AlphaFold monomer V2.0 prediction for ring finger protein 141 (Q8WVD5) · a predicted model of the same protein · chain A against A, TM-score 0.52

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8WVD5
Elsewhere: RCSB PDB 5XEK · PDBe 5XEK · UniProt Q8WVD5

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