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Structure of the cellobiohydrolase CEL6A from phanerochaete chrysosporium in complex with cellobiose at 2.1 ångström

Analyse Structure of the cellobiohydrolase CEL6A from phanerochaete chrysosporium in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5XCZ
Type: protein
Length: 358 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glucanase
EC: 3.2.1.-
UniProt: H3K419
Ligands: GLC, BGC
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glucanase (EC 3.2.1.-)	protein	358	39% helix, 12% strand	H3K419

Ligands and binding sites

GLC · alpha-D-glucopyranose · sugar · chains A
BGC · beta-D-glucopyranose · sugar · chains A
TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	277	0.70	0.85	41	GLC, BGC, TRS

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5XCZ · Structure of the cellobiohydrolase Cel6A from Phanerochaete chrysosporium in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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Every structure of UniProt H3K419
Elsewhere: RCSB PDB 5XCZ · PDBe 5XCZ · UniProt H3K419

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