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The structure of the flagellar hook junction protein HAP1 (flgk) from campylobacter jejuni
Analyse The structure of the flagellar hook junction protein HAP1 (flgk) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5XBJ
- Type
- protein
- Length
- 500 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flagellar hook-associated protein flgk
- UniProt
- A0A218KZD0
- Pockets
- 5 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flagellar hook-associated protein flgk | protein | 500 | 47% helix, 19% strand | A0A218KZD0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 249 | 0.56 | 0.78 | 40 | empty |
| 2 | 253 | 0.50 | 0.74 | 26 | empty |
| 3 | 108 | 0.38 | 0.75 | 23 | empty |
| 4 | 84 | 0.35 | 0.76 | 20 | empty |
| 5 | 77 | 0.31 | 0.74 | 20 | empty |
Compared structures
- 5XBJ · The structure of the flagellar hook junction protein HAP1 (FlgK) from Campylobacter jejuni · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A218KZD0
- Elsewhere: RCSB PDB 5XBJ · PDBe 5XBJ · UniProt A0A218KZD0
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