Research workbench
Crk SH3 domain complexed with peptoid inhibitor
Analyse Crk SH3 domain complexed with peptoid inhibitor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1B07
- Type
- protein
- Length
- 69 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (proto-oncogene crk (crk)); Protein (SH3 peptoid inhibitor)
- UniProt
- Q64010
- Ligands
- PYJ
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (proto-oncogene crk (crk)) | protein | 59 | 5% helix, 44% strand | Q64010 |
| C | Protein (SH3 peptoid inhibitor) | protein | 10 | 0% helix, 0% strand | — |
Ligands and binding sites
- PYJ · Phenylethane · ligand · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–C · 381 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q64010
- Elsewhere: RCSB PDB 1B07 · PDBe 1B07 · UniProt Q64010
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