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Crystal structure of bacteriophage CBA120 tailspike protein 2 enzymatically active domain (TSP2DN, ORF211) complex with escherichia COLI O157-antigen
Analyse Crystal structure of bacteriophage CBA120 tailspike protein 2 enzymatically… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5W6S
- Type
- protein
- Length
- 676 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G3M190
- Ligands
- 9WJ, FUC, A2G, BGC, NA, K, CL, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 676 | — | G3M190 |
Ligands and binding sites
- 9WJ · 4-acetamido-4,6-dideoxy-beta-D-mannopyranose · ligand · chains A
- FUC · alpha-L-fucopyranose · sugar · chains A
- A2G · 2-acetamido-2-deoxy-alpha-D-galactopyranose · sugar
- BGC · beta-D-glucopyranose · sugar
- NA · Sodium ion · metal · chains A
- K · Potassium ion · metal · chains A
- CL · Chloride ion · ion · 3 copies · chains A
- SO4 · Sulfate ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
- PGE · Triethylene glycol · additive · 5 copies · chains A
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5W6S · Crystal structure of Bacteriophage CBA120 tailspike protein 2 enzymatically active domain… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G3M190
- Elsewhere: RCSB PDB 5W6S · PDBe 5W6S · UniProt G3M190
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