Research workbench

Solution structure of blsm

Analyse Solution structure of blsm in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5VTO
Type: protein
Length: 326 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Blasticidin M
UniProt: A0A1B1BCS8
Pockets: 1 · best druggability 0.33

Structure

solution nmr · 1 distinct chain · 54% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Blasticidin M	protein	163	54% helix, 9% strand	A0A1B1BCS8

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	54	0.33	0.77	19	empty

Interfaces

1 interface between chains.

A–B · 1460 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

5VTO · Solution Structure of BlsM · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1B1BCS8
Elsewhere: RCSB PDB 5VTO · PDBe 5VTO · UniProt A0A1B1BCS8

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.