Research workbench
The structure of TAMB963-1138 from escherichia COLI reveals a novel hydrophobic beta-taco fold
Analyse The structure of TAMB963-1138 from escherichia COLI reveals a novel hydrophobic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5VTG
- Type
- protein
- Length
- 267 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Translocation and assembly module subunit tamb
- UniProt
- P39321
- Pockets
- 1 · best druggability 0.72
Structure
x-ray diffraction · 2 distinct chains · 0% helix, 73% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Translocation and assembly module subunit tamb | protein | 136 | 0% helix, 72% strand | P39321 |
| B | Translocation and assembly module subunit tamb | protein | 131 | 0% helix, 73% strand | P39321 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1111 | 0.72 | 0.74 | 86 | empty |
Interfaces
1 interface between chains.
- A–B · 892 Ų buried · 25 hydrogen bonds · protein-protein
Compared structures
- 5VTG · The structure of TamB963-1138 from Escherichia coli reveals a novel hydrophobic Beta-taco… · the same entry in another collection · chain A against A, TM-score 1.00
- P39321 · AlphaFold monomer V2.0 prediction for translocation and assembly module subunit tamb… · a predicted model of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P39321
- Elsewhere: RCSB PDB 5VTG · PDBe 5VTG · UniProt P39321
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