Research workbench
The refined crystal structure of lysozyme from the rainbow trout (oncorhynchus mykiss)
Analyse The refined crystal structure of lysozyme from the rainbow trout (oncorhynchus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1LMN
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rainbow trout lysozyme
- EC
- 3.2.1.17
- UniProt
- P11941
- Pockets
- 1 · best druggability 0.35
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rainbow trout lysozyme (EC 3.2.1.17) | protein | 129 | 38% helix, 11% strand | P11941 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.35 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1LMN · The refined crystal structure of lysozyme from the rainbow trout (oncorhynchus mykiss) · the same entry in another collection · chain A against A, TM-score 1.00
- P11941 · AlphaFold monomer V2.0 prediction for lysozyme C II (P11941) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11941
- Elsewhere: RCSB PDB 1LMN · PDBe 1LMN · UniProt P11941
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