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Crystal structure of macrocycles containing abeta 15-21 (QKLV(PHI)FA) and abeta 30-36 (AII(SAR)L(ORN)V)

Analyse Crystal structure of macrocycles containing abeta 15-21 (QKLV(PHI)FA) and abeta… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5V64
Type: protein
Length: 16 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Orn-gln-lys-leu-val-phi-phe-ala-orn-ala-ile-ile-sar-leu- met-val
Ligands: NA

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 63% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Orn-gln-lys-leu-val-phi-phe-ala-orn-ala-ile-ile-sar-leu- met-val	protein	16	0% helix, 63% strand	—

Ligands and binding sites

NA · Sodium ion · metal · 2 copies · chains A
FLC · Citrate anion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 modified (nonstandard, methylation).

Compared structures

5V64 · Crystal structure of macrocycles containing Abeta 15-21 (QKLV(PHI)FA) and Abeta 30-36… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 5V64 · PDBe 5V64

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