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Crystal structure of leucine-rich protein regulator, elrr, from enterococcus faecalis

Analyse Crystal structure of leucine-rich protein regulator, elrr, from enterococcus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5V5U
Type: protein
Length: 600 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Conserved domain protein
UniProt: Q830T5
Pockets: 5 · best druggability 0.77

Structure

x-ray diffraction · 2 distinct chains · 74% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Conserved domain protein	protein	297	73% helix, 1% strand	Q830T5
A	Conserved domain protein	protein	303	74% helix, 1% strand	Q830T5

Pockets

5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	869	0.77	0.80	94	empty
2	548	0.72	0.80	53	empty
3	454	0.71	0.81	48	empty
4	87	0.51	0.83	15	empty
5	81	0.45	0.81	16	empty

Interfaces

1 interface between chains.

B–A · 4138 Å² buried · 49 hydrogen bonds · protein-protein

Compared structures

5V5U · Crystal structure of leucine-rich protein regulator, ElrR, from Enterococcus faecalis · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q830T5
Elsewhere: RCSB PDB 5V5U · PDBe 5V5U · UniProt Q830T5

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