Research workbench
The crystal structure of the transcriptional regulator slya
Analyse The crystal structure of the transcriptional regulator slya in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1LJ9
- Type
- protein
- Length
- 286 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator slya
- UniProt
- Q82ZP8
- Pockets
- 1 · best druggability 0.79
Structure
x-ray diffraction · 2 distinct chains · 70% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator slya | protein | 144 | 69% helix, 8% strand | Q82ZP8 |
| B | Transcriptional regulator slya | protein | 142 | 70% helix, 8% strand | Q82ZP8 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 831 | 0.79 | 0.82 | 80 | empty |
Interfaces
1 interface between chains.
- A–B · 2716 Ų buried · 32 hydrogen bonds · protein-protein
Compared structures
- 1LJ9 · The crystal structure of the transcriptional regulator SlyA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q82ZP8
- Elsewhere: RCSB PDB 1LJ9 · PDBe 1LJ9 · UniProt Q82ZP8
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