Research workbench
Crystal structure of (+)-limonene synthase from citrus sinensis
Analyse Crystal structure of (+)-limonene synthase from citrus sinensis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5UV0
- Type
- protein
- Length
- 522 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- (+)-limonene synthase
- UniProt
- A0A1C9J6A7
- Pockets
- 7 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | (+)-limonene synthase | protein | 522 | 74% helix, 1% strand | A0A1C9J6A7 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 562 | 0.77 | 0.84 | 61 | empty |
| 2 | 795 | 0.76 | 0.80 | 81 | empty |
| 3 | 260 | 0.65 | 0.82 | 37 | empty |
| 4 | 251 | 0.59 | 0.79 | 25 | empty |
| 5 | 103 | 0.50 | 0.82 | 19 | empty |
Compared structures
- 5UV0 · Crystal Structure of (+)-Limonene Synthase from Citrus sinensis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C9J6A7
- Elsewhere: RCSB PDB 5UV0 · PDBe 5UV0 · UniProt A0A1C9J6A7
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