Research workbench
Streptomyces sahachiroi DNA glycosylase alkz
Analyse Streptomyces sahachiroi DNA glycosylase alkz in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5UUJ
- Type
- protein
- Length
- 371 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Alkz
- UniProt
- B4XYC8
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alkz | protein | 371 | 51% helix, 17% strand | B4XYC8 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.41 | 0.77 | 19 | empty |
| 2 | 96 | 0.36 | 0.74 | 21 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 5UUJ · Streptomyces sahachiroi DNA glycosylase AlkZ · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4XYC8
- Elsewhere: RCSB PDB 5UUJ · PDBe 5UUJ · UniProt B4XYC8
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