Research workbench
Bence jones protein cle, a lambda III immunoglobulin light- chain dimer
Analyse Bence jones protein cle, a lambda III immunoglobulin light- chain dimer in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1LIL
- Type
- protein
- Length
- 424 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lambda III bence jones protein cle
- UniProt
- P01842
- Pockets
- 3 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Lambda III bence jones protein cle | protein | 212 | 7% helix, 46% strand | P01842 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 519 | 0.61 | 0.74 | 57 | empty |
| 2 | 173 | 0.57 | 0.81 | 27 | empty |
| 3 | 191 | 0.55 | 0.78 | 22 | empty |
Interfaces
1 interface between chains.
- A–B · 1938 Ų buried · 27 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 5 disulfide (disulfide).
Compared structures
- 1LIL · Bence jones protein cle, a lambda III immunoglobulin light-chain dimer · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01842
- Elsewhere: RCSB PDB 1LIL · PDBe 1LIL · UniProt P01842
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.