GL1X · GenesisL1 explorer

Research workbench

Heterogeneous-backbone foldamer mimic of the SP1-3 zinc finger

Analyse Heterogeneous-backbone foldamer mimic of the SP1-3 zinc finger in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5US3
Type
protein
Length
28 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Heterogeneous-backbone variant of the SP1-3 zinc finger: N- me-ALA3, N-me-ARG10…
Ligands
ZN, NH2

Structure

solution nmr · 1 distinct chain · 43% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHeterogeneous-backbone variant of the SP1-3 zinc finger: N- me-ALA3, N-me-ARG10, beta-3-ASP15, beta-3-LYS19, BETA3-LYS22, beta-3- GLN25protein2843% helix, 0% strand—

Ligands and binding sites

  • ZN · Zinc ion · metal · chains A
  • NH2 · Amino group · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 7 modified (nonstandard).

Compared structures

  • 5US3 · Heterogeneous-backbone Foldamer Mimic of the Sp1-3 Zinc Finger · the same entry in another collection · chain A against A, TM-score 0.91

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.