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Vesicular stomatits virus N protein in complex with inhibitory nanobody 1307

Analyse Vesicular stomatits virus N protein in complex with inhibitory nanobody 1307 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5UK4
Type: protein + RNA
Length: 11,038 residues
Chains: 44
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P03521, A0A192B6J6

Structure

x-ray diffraction · 16 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
P	—	protein	414	—	P03521
p, b, q, c, r, d, s, e, t, k, l, n, m, f, g, h, i, o, j, a	—	protein	125	—	A0A192B6J6
B	—	protein	412	—	P03521
Q	—	protein	419	—	P03521
C	—	protein	417	—	P03521
R	—	protein	419	—	P03521
D, N	—	protein	418	—	P03521
S, T, K, L, F	—	protein	421	—	P03521
E	—	protein	413	—	P03521
M	—	protein	416	—	P03521
G	—	protein	416	—	P03521
H	—	protein	420	—	P03521
I	—	protein	415	—	P03521
O, J	—	protein	420	—	P03521
A	—	protein	416	—	P03521
u, v, w, x	—	rna	45	—	—

Compared structures

5UK4 · Vesicular stomatits virus N protein in complex with inhibitory nanobody 1307 · the same entry in another collection · chain p against p, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03521
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Elsewhere: RCSB PDB 5UK4 · PDBe 5UK4 · UniProt P03521 · UniProt A0A192B6J6

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