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Solution structure of herg-specific scorpion toxin bekm-1

Analyse Solution structure of herg-specific scorpion toxin bekm-1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1LGL
Type
protein
Length
36 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Bekm-1 toxin
UniProt
Q9BKB7

Structure

solution nmr · 1 distinct chain · 28% helix, 36% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ABekm-1 toxinprotein3628% helix, 36% strandQ9BKB7

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 1LGL · Solution structure of HERG-specific scorpion toxin BeKm-1 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9BKB7 · AlphaFold monomer V2.0 prediction for potassium channel toxin gamma- ktx 2.1 (Q9BKB7) · a predicted model of the same protein · chain A against A, TM-score 0.79

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