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Bacterial adhesin from mobiluncus mulieris containing intramolecular disulfide, isopeptide, and ester bond cross-links (space group P1)
Analyse Bacterial adhesin from mobiluncus mulieris containing intramolecular disulfide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5U5O
- Type
- protein
- Length
- 287 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lpxtg-motif cell wall anchor domain protein
- UniProt
- E0QN07
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lpxtg-motif cell wall anchor domain protein | protein | 287 | 10% helix, 52% strand | E0QN07 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.36 | 0.75 | 19 | empty |
| 2 | 57 | 0.29 | 0.74 | 16 | empty |
Modifications
Observed in the structure: 1 isopeptide (isopeptide).
Compared structures
- 5U5O · Bacterial adhesin from Mobiluncus mulieris containing intramolecular disulfide… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E0QN07
- Elsewhere: RCSB PDB 5U5O · PDBe 5U5O · UniProt E0QN07
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