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Crystal structure of the zrt-/irt-like protein from bordetella bronchiseptica with bound ZN2+

Analyse Crystal structure of the zrt-/irt-like protein from bordetella bronchiseptica… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5TSA
Type: protein
Length: 233 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Membrane protein
UniProt: A0A0H3LM39
Ligands: ZN, CD
Pockets: 1 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 85% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Membrane protein	protein	233	85% helix, 0% strand	A0A0H3LM39

Ligands and binding sites

ZN · Zinc ion · metal · 6 copies · chains A
CD · Cadmium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	134	0.50	0.80	28	ZN

Compared structures

5TSA · Crystal structure of the Zrt-/Irt-like protein from Bordetella bronchiseptica with bound… · the same entry in another collection · chain A against A, TM-score 1.00

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H3LM39
Elsewhere: RCSB PDB 5TSA · PDBe 5TSA · UniProt A0A0H3LM39

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