Research workbench
Crystal structure of uncharacterized cupredoxin-like domain protein from bacillus anthracis
Analyse Crystal structure of uncharacterized cupredoxin-like domain protein from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5TK4
- Type
- protein
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cytochrome B
- UniProt
- Q81ST4
- Pockets
- 2 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Cytochrome B | protein | 92 | 3% helix, 49% strand | Q81ST4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 172 | 0.65 | 0.85 | 35 | empty |
| 2 | 112 | 0.34 | 0.72 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 428 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered, oxidation).
Compared structures
- 5TK4 · Crystal Structure of Uncharacterized Cupredoxin-like Domain Protein from Bacillus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q81ST4
- Elsewhere: RCSB PDB 5TK4 · PDBe 5TK4 · UniProt Q81ST4
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