Research workbench
Monoclinic crystal form of the epob nrps cyclization-docking bidomain from sorangium cellulosum
Analyse Monoclinic crystal form of the epob nrps cyclization-docking bidomain from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5T7Z
- Type
- protein
- Length
- 493 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Epob
- UniProt
- Q9KIZ9
- Pockets
- 7 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Epob | protein | 493 | 41% helix, 21% strand | Q9KIZ9 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 90 | 0.76 | 0.97 | 26 | empty |
| 2 | 433 | 0.64 | 0.78 | 56 | empty |
| 3 | 190 | 0.64 | 0.84 | 40 | empty |
| 4 | 244 | 0.59 | 0.79 | 32 | empty |
| 5 | 147 | 0.50 | 0.78 | 21 | empty |
Compared structures
- 5T7Z · Monoclinic crystal form of the EpoB NRPS cyclization-docking bidomain from Sorangium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KIZ9
- Elsewhere: RCSB PDB 5T7Z · PDBe 5T7Z · UniProt Q9KIZ9
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