Research workbench
Structure of the SLC4 transporter BOR1P in an inward-facing conformation
Analyse Structure of the SLC4 transporter BOR1P in an inward-facing conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5SV9
- Type
- protein
- Length
- 952 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- BOR1P boron transporter
- Pockets
- 20 · best druggability 0.84
Structure
electron microscopy · 1 distinct chain · 65% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | BOR1P boron transporter | protein | 476 | 65% helix, 1% strand | — |
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1200 | 0.84 | 0.85 | 133 | empty |
| 2 | 1179 | 0.84 | 0.85 | 123 | empty |
| 3 | 798 | 0.80 | 0.83 | 104 | empty |
| 4 | 163 | 0.79 | 0.95 | 43 | empty |
| 5 | 475 | 0.74 | 0.82 | 74 | empty |
Interfaces
1 interface between chains.
- A–B · 1214 Ų buried · 23 hydrogen bonds · protein-protein
Compared structures
- 5SV9 · Structure of the SLC4 transporter Bor1p in an inward-facing conformation · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5SV9 · PDBe 5SV9
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