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The structure of double ringed trimeric shell protein MSM0271 from the rmm microcompartment

Analyse The structure of double ringed trimeric shell protein MSM0271 from the rmm… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5SUH
Type: protein
Length: 609 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MSM0271 protein
UniProt: A0QP48
Pockets: 2 · best druggability 0.63

Structure

x-ray diffraction · 3 distinct chains · 37% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MSM0271 protein	protein	204	37% helix, 30% strand	A0QP48
B	MSM0271 protein	protein	202	35% helix, 31% strand	A0QP48
C	MSM0271 protein	protein	203	37% helix, 30% strand	A0QP48

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	309	0.63	0.79	32	empty
2	462	0.60	0.75	54	empty

Interfaces

3 interfaces between chains.

A–C · 1126 Å² buried · 19 hydrogen bonds · protein-protein
B–C · 1111 Å² buried · 15 hydrogen bonds · protein-protein
A–B · 1096 Å² buried · 18 hydrogen bonds · protein-protein

Compared structures

5SUH · The structure of double ringed trimeric shell protein MSM0271 from the RMM… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0QP48
Elsewhere: RCSB PDB 5SUH · PDBe 5SUH · UniProt A0QP48

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