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Pandda analysis group deposition -- crystal structure of phip in complex with Z755044716

Analyse Pandda analysis group deposition -- crystal structure of phip in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5RJZ
Type
protein
Length
119 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
PH-interacting protein
UniProt
Q8WWQ0
Ligands
K0J
Pockets
1 · best druggability 0.55

Structure

x-ray diffraction · 1 distinct chain · 69% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APH-interacting proteinprotein11969% helix, 0% strandQ8WWQ0

Ligands and binding sites

  • K0J · N-ethyl-1H-1,2,3-triazole-4-carboxamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11040.550.8422K0J

Compared structures

  • 5RJZ · PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z755044716 · the same entry in another collection · chain A against A, TM-score 1.00

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