Research workbench

NMR structure of oxidized adrenodoxin

Analyse NMR structure of oxidized adrenodoxin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1L6U
Type: protein
Length: 108 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Adrenodoxin 1
UniProt: P00257
Ligands: FES
Pockets: 1 · best druggability 0.66

Structure

solution nmr · 1 distinct chain · 13% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Adrenodoxin 1	protein	108	13% helix, 15% strand	P00257

Ligands and binding sites

FES · Fe2/s2 (inorganic) cluster · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.66	0.96	23	empty

Compared structures

1L6U · NMR structure of oxidized adrenodoxin · the same entry in another collection · chain A against A, TM-score 1.00
P00257 · AlphaFold monomer V2.0 prediction for adrenodoxin, mitochondrial (P00257) · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00257
Elsewhere: RCSB PDB 1L6U · PDBe 1L6U · UniProt P00257

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