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Wild-type umud' from E. COLI

Analyse Wild-type umud' from E. COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1AY9
Type: protein
Length: 216 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Umud protein
EC: 3.4.21.-
UniProt: P04153
Pockets: 1 · best druggability 0.48

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Umud protein (EC 3.4.21.-)	protein	108	10% helix, 37% strand	P04153

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	161	0.48	0.77	33	empty

Interfaces

1 interface between chains.

A–B · 561 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

1AY9 · Wild-type umud' from E. COLI · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P04153
Elsewhere: RCSB PDB 1AY9 · PDBe 1AY9 · UniProt P04153

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