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Structure of TGPLP1 apcbeta domain

Analyse Structure of TGPLP1 apcbeta domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OUO
Type
protein
Length
263 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Perforin-like protein 1
UniProt
A1E348
Ligands
MG, CL

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 48% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APerforin-like protein 1protein2636% helix, 48% strandA1E348

Ligands and binding sites

  • MG · Magnesium ion · metal · 2 copies · chains A
  • CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 5OUO · Structure of TgPLP1 APCbeta domain · the same entry in another collection · chain A against A, TM-score 1.00

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