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G-quadruplex structure of DNA oligonucleotide containing ggggcc repeats linked to als and ftd

Analyse G-quadruplex structure of DNA oligonucleotide containing ggggcc repeats linked… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OPH
Type
DNA
Length
22 nucleotides
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
DNA (5'- D(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*(BGM) P*G)-3')

Structure

solution nmr · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
ADNA (5'- D(*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*GP*GP*CP*CP*GP*GP*(BGM) P*G)-3')dna22——

Modifications

Observed in the structure: 1 modified (nucleotide modification).

Compared structures

  • 5OPH · G-quadruplex structure of DNA oligonucleotide containing GGGGCC repeats linked to ALS and… · the same entry in another collection · chain A against A, TM-score 1.00

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