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Ligand-based NMR study of C-X-C chemokine receptor type 4 (CXCR4)- ligand interactions in living cancer cells

Analyse Ligand-based NMR study of C-X-C chemokine receptor type 4 (CXCR4)- ligand… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OLF
Type
protein
Length
6 residues
Chains
1
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Gba-ala-cys-arg-phe-phe-cys
Ligands
9XQ

Structure

solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGba-ala-cys-arg-phe-phe-cysprotein60% helix, 0% strand—

Ligands and binding sites

  • 9XQ · [azanyl-[(3-carboxyphenyl)amino]methylidene]azanium · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 covalent, 1 disulfide (covalent ligand, disulfide).

Compared structures

  • 5OLF · Ligand-Based NMR Study of C-X-C Chemokine Receptor Type 4 (CXCR4)-Ligand Interactions in… · the same entry in another collection · chain A against A, TM-score 1.00

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