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Structure of active cystathionine B-synthase from apis mellifera

Analyse Structure of active cystathionine B-synthase from apis mellifera in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OHX
Type
protein
Length
976 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q2V0C9
Ligands
HEM, PLP

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein488—Q2V0C9

Ligands and binding sites

  • HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
  • PLP · Pyridoxal-5'-phosphate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OHX · Structure of active cystathionine B-synthase from Apis mellifera · the same entry in another collection · chain A against A, TM-score 1.00
  • Q2V0C9 · AlphaFold monomer V2.0 prediction for cystathionine beta-synthase (Q2V0C9) · a predicted model of the same protein · chain B against A, TM-score 0.96

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