Research workbench
AFROM2 cnh domain
Analyse AFROM2 cnh domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5O51
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Rho guanyl nucleotide exchange factor (ROM2), putative
- UniProt
- Q4WUI2
- Pockets
- 4 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 55% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rho guanyl nucleotide exchange factor (ROM2), putative | protein | 309 | 6% helix, 55% strand | Q4WUI2 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 685 | 0.66 | 0.75 | 47 | empty |
| 2 | 123 | 0.44 | 0.77 | 21 | empty |
| 3 | 74 | 0.41 | 0.79 | 17 | empty |
| 4 | 94 | 0.37 | 0.75 | 16 | empty |
Compared structures
- 5O51 · AfRom2 CNH domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4WUI2
- Elsewhere: RCSB PDB 5O51 · PDBe 5O51 · UniProt Q4WUI2
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