Research workbench
Crystal structure of btubc (bklc) from P. vanneervenii
Analyse Crystal structure of btubc (bklc) from P. vanneervenii in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5O01
- Type
- protein
- Length
- 508 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bklc (bacterial kinesin-light chain-like)
- UniProt
- A8Y5U5
- Pockets
- 3 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Bklc (bacterial kinesin-light chain-like) | protein | 254 | 76% helix, 0% strand | A8Y5U5 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 541 | 0.71 | 0.80 | 50 | empty |
| 2 | 184 | 0.48 | 0.76 | 22 | empty |
| 3 | 80 | 0.30 | 0.72 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 745 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 5O01 · Crystal structure of BtubC (BKLC) from P. vanneervenii · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8Y5U5
- Elsewhere: RCSB PDB 5O01 · PDBe 5O01 · UniProt A8Y5U5
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