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Hrsv M2-1 core domain

Analyse Hrsv M2-1 core domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5NOH
Type: protein
Length: 206 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcription elongation factor M2-1
UniProt: A0A059TDD0
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Transcription elongation factor M2-1	protein	103	78% helix, 0% strand	A0A059TDD0

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	57	0.30	0.75	11	empty

Interfaces

1 interface between chains.

A–B · 445 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

5NOH · HRSV M2-1 core domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A059TDD0
Elsewhere: RCSB PDB 5NOH · PDBe 5NOH · UniProt A0A059TDD0

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