Research workbench
Gadolinium phased PBP2 (SSO6202) at 2.2 ang
Analyse Gadolinium phased PBP2 (SSO6202) at 2.2 ang in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5N35
- Type
- protein
- Length
- 60 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- POLB1 binding protein 2 (PBP2)
- UniProt
- A0A0E3GTJ4
- Ligands
- GD, NO3
Structure
x-ray diffraction · 1 distinct chain · 55% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | POLB1 binding protein 2 (PBP2) | protein | 60 | 55% helix, 17% strand | A0A0E3GTJ4 |
Ligands and binding sites
- GD · Gadolinium atom · metal · 2 copies · chains A
- NO3 · Nitrate ion · ion · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5N35 · Gadolinium phased PBP2 (SSO6202) at 2.2 Ang · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E3GTJ4
- Elsewhere: RCSB PDB 5N35 · PDBe 5N35 · UniProt A0A0E3GTJ4
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