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NMR solution structure of the major apple allergen mal D 1

Analyse NMR solution structure of the major apple allergen mal D 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5MMU
Type: protein
Length: 158 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Major allergen mal D 1
UniProt: P43211
Pockets: 1 · best druggability 0.84

Structure

solution nmr · 1 distinct chain · 26% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Major allergen mal D 1	protein	158	26% helix, 41% strand	P43211

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	604	0.84	0.88	52	empty

Compared structures

5MMU · NMR solution structure of the major apple allergen Mal d 1 · the same entry in another collection · chain A against A, TM-score 1.00
P43211 · AlphaFold monomer V2.0 prediction for major allergen mal D 1 (P43211) · a predicted model of the same protein · chain A against A, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P43211
Elsewhere: RCSB PDB 5MMU · PDBe 5MMU · UniProt P43211

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