Research workbench
Aba receptor from citrus, CSPYL1
Analyse Aba receptor from citrus, CSPYL1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5MMQ
- Type
- protein
- Length
- 378 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CSPYL1
- UniProt
- A0A067E666
- Pockets
- 2 · best druggability 0.87
Structure
x-ray diffraction · 2 distinct chains · 27% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CSPYL1 | protein | 190 | 27% helix, 34% strand | A0A067E666 |
| B | CSPYL1 | protein | 188 | 27% helix, 35% strand | A0A067E666 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 338 | 0.87 | 0.96 | 48 | empty |
| 2 | 79 | 0.38 | 0.77 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 985 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 5MMQ · Aba receptor from citrus, CSPYL1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A067E666
- Elsewhere: RCSB PDB 5MMQ · PDBe 5MMQ · UniProt A0A067E666
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