Bromodomain of mouse pcaf with (R)-4-chloro-2-methyl-5-((1- methylpiperidin-3-YL)AMINO)PYRIDAZIN-3(2H)-one

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 0% strand (DSSP).

Ligands and binding sites

• P2L · 4-chlorol-2-methyl-5-[[(3~{R})-1-methylpiperidin-3-yl]amino]pyridazin-3-one · ligand · chains A
• EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 5ML0 · Bromodomain of Mouse PCAF with (R)-4-chloro-2-methyl-5-((1-methylpiperidin-3-yl)amino)pyri… · the same entry in another collection · chain A against A, TM-score 1.00
• Q9JHD1 · AlphaFold monomer V2.0 prediction for histone acetyltransferase KAT2B (Q9JHD1) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q9JHD1
• Elsewhere: RCSB PDB 5ML0 · PDBe 5ML0 · UniProt Q9JHD1