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Solution structure of the RBM5 ocre domain in complex with polyproline smn peptide.

Analyse Solution structure of the RBM5 ocre domain in complex with polyproline smn… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5MF9
Type: protein
Length: 75 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA-binding protein 5; Survival motor neuron protein
UniProt: P52756, Q16637

Structure

solution nmr · 2 distinct chains · 0% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA-binding protein 5	protein	64	0% helix, 33% strand	P52756
B	Survival motor neuron protein	protein	11	0% helix, 0% strand	Q16637

Interfaces

1 interface between chains.

A–B · 521 Å² buried · 9 hydrogen bonds · protein-protein

Compared structures

5MF9 · Solution structure of the RBM5 OCRE domain in complex with polyproline SmN peptide. · the same entry in another collection · chain A against A, TM-score 1.00
P52756 · AlphaFold monomer V2.0 prediction for RNA-binding protein 5 (P52756) · a predicted model of the same protein · chain A against A, TM-score 0.69
Q16637 · AlphaFold monomer V2.0 prediction for survival motor neuron protein (Q16637) · a predicted model of the same protein · chain B against A, TM-score 0.39

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P52756
Every structure of UniProt Q16637
Elsewhere: RCSB PDB 5MF9 · PDBe 5MF9 · UniProt P52756 · UniProt Q16637

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