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Structure of a bacterial light-regulated adenylyl cyclase
Analyse Structure of a bacterial light-regulated adenylyl cyclase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5MBH
- Type
- protein
- Length
- 339 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta subunit of photoactivated adenylyl cyclase
- UniProt
- A7BT71
- Ligands
- FMN
- Pockets
- 7 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta subunit of photoactivated adenylyl cyclase | protein | 339 | 42% helix, 31% strand | A7BT71 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 244 | 0.66 | 0.83 | 36 | FMN |
| 2 | 56 | 0.43 | 0.83 | 16 | empty |
| 3 | 52 | 0.35 | 0.79 | 14 | empty |
| 4 | 52 | 0.31 | 0.76 | 13 | empty |
| 5 | 62 | 0.31 | 0.75 | 13 | empty |
Compared structures
- 5MBH · Structure of a bacterial light-regulated adenylyl cyclase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7BT71
- Elsewhere: RCSB PDB 5MBH · PDBe 5MBH · UniProt A7BT71
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