Research workbench
Crystal structure of eremococcus coleocola manganese transporter mutant E129Q
Analyse Crystal structure of eremococcus coleocola manganese transporter mutant E129Q in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5M8K
- Type
- protein
- Length
- 494 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Divalent metal cation transporter mnth
- UniProt
- E4KPW4
- Pockets
- 6 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Divalent metal cation transporter mnth | protein | 494 | 76% helix, 0% strand | E4KPW4 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 616 | 0.74 | 0.81 | 56 | empty |
| 2 | 92 | 0.60 | 0.88 | 26 | empty |
| 3 | 95 | 0.57 | 0.86 | 17 | empty |
| 4 | 186 | 0.47 | 0.75 | 31 | empty |
| 5 | 61 | 0.36 | 0.78 | 18 | empty |
Compared structures
- 5M8K · Crystal structure of Eremococcus coleocola manganese transporter mutant E129Q · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E4KPW4
- Elsewhere: RCSB PDB 5M8K · PDBe 5M8K · UniProt E4KPW4
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