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Ribosome-bound yidc insertase

Analyse Ribosome-bound yidc insertase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5M5H
Type: protein
Length: 132 residues
Chains: 1
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Membrane protein insertase yidc
UniProt: B7MGC7
Pockets: 2 · best druggability 0.41

Structure

electron microscopy · 1 distinct chain · 58% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Membrane protein insertase yidc	protein	132	58% helix, 0% strand	B7MGC7

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	102	0.41	0.76	17	empty
2	50	0.28	0.74	12	empty

Compared structures

5M5H · Ribosome-bound yidc insertase · the same entry in another collection · chain A against A, TM-score 1.00
B7MGC7 · AlphaFold monomer V2.0 prediction for membrane protein insertase yidc (B7MGC7) · a predicted model of the same protein · chain A against A, TM-score 0.82

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B7MGC7
Elsewhere: RCSB PDB 5M5H · PDBe 5M5H · UniProt B7MGC7

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