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C-terminal domain structure of vsg M1.1

Analyse C-terminal domain structure of vsg M1.1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5M4T
Type: protein
Length: 73 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Variant surface glycoprotein mitat 1.1
UniProt: P26331

Structure

solution nmr · 1 distinct chain · 41% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Variant surface glycoprotein mitat 1.1	protein	73	41% helix, 11% strand	P26331

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5M4T · C-terminal domain structure of VSG M1.1 · the same entry in another collection · chain A against A, TM-score 1.00
P26331 · AlphaFold monomer V2.0 prediction for variant surface glycoprotein mitat 1.1 (P26331) · a predicted model of the same protein · chain A against A, TM-score 0.59

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P26331
Elsewhere: RCSB PDB 5M4T · PDBe 5M4T · UniProt P26331

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