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Crystal structure of the large terminase nuclease from thermophilic phage G20C

Analyse Crystal structure of the large terminase nuclease from thermophilic phage G20C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5M1F
Type: protein
Length: 186 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phage terminase large subunit
UniProt: A7XXR1
Pockets: 1 · best druggability 0.31

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phage terminase large subunit	protein	186	33% helix, 29% strand	A7XXR1

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	78	0.31	0.74	18	empty

Compared structures

5M1F · Crystal structure of the large terminase nuclease from thermophilic phage G20c · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A7XXR1
Elsewhere: RCSB PDB 5M1F · PDBe 5M1F · UniProt A7XXR1

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