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Crystal structure of cytochrome P450 olet in complex with formate

Analyse Crystal structure of cytochrome P450 olet in complex with formate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5M0N
Type: protein
Length: 423 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Terminal olefin-forming fatty acid decarboxylase
UniProt: E9NSU2
Ligands: HEM, SO4
Pockets: 3 · best druggability 0.88

Structure

x-ray diffraction · 1 distinct chain · 50% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Terminal olefin-forming fatty acid decarboxylase	protein	423	50% helix, 12% strand	E9NSU2

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A
SO4 · Sulfate ion · ion · chains A
FMT · Formic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	573	0.88	0.93	59	HEM, FMT
2	53	0.30	0.76	16	empty
3	60	0.29	0.75	14	empty

Compared structures

5M0N · Crystal structure of cytochrome P450 OleT in complex with formate · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt E9NSU2
Elsewhere: RCSB PDB 5M0N · PDBe 5M0N · UniProt E9NSU2

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