Research workbench
Polyalanine chain built in bacteriophage PHI812K1-420 cement protein density MAP
Analyse Polyalanine chain built in bacteriophage PHI812K1-420 cement protein density MAP in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5LIJ
- Type
- protein
- Length
- 152 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polyalanine chain built in bacteriophage PHI812K1-420 cement protein density MAP
- Pockets
- 2 · best druggability 0.71
Structure
electron microscopy · 1 distinct chain · 12% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| P | Polyalanine chain built in bacteriophage PHI812K1-420 cement protein density MAP | protein | 152 | 12% helix, 13% strand | — |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 811 | 0.71 | 0.77 | 99 | empty |
| 2 | 59 | 0.25 | 0.72 | 23 | empty |
Compared structures
- 5LIJ · polyalanine chain built in bacteriophage phi812K1-420 cement protein density map · the same entry in another collection · chain P against P, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5LIJ · PDBe 5LIJ
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