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NMR structure of chicken AVBD7 defensin

Analyse NMR structure of chicken AVBD7 defensin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5LCS
Type: protein
Length: 47 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Gallinacin-7
UniProt: Q6QLR2

Structure

solution nmr · 1 distinct chain · 6% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Gallinacin-7	protein	47	6% helix, 34% strand	Q6QLR2

Modifications

Observed in the structure: 3 disulfide, 1 modified (disulfide, cyclization).

Compared structures

5LCS · NMR structure of Chicken AvBD7 defensin · the same entry in another collection · chain A against A, TM-score 1.00
Q6QLR2 · AlphaFold monomer V2.0 prediction for gallinacin-7 (Q6QLR2) · a predicted model of the same protein · chain A against A, TM-score 0.58

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6QLR2
Elsewhere: RCSB PDB 5LCS · PDBe 5LCS · UniProt Q6QLR2

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