Research workbench

NMR structure of ribosome-binding factor a (rbfa)

Analyse NMR structure of ribosome-binding factor a (rbfa) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1KKG
Type: protein
Length: 108 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ribosome-binding factor a
UniProt: P0A7G2
Pockets: 1 · best druggability 0.63

Structure

solution nmr · 1 distinct chain · 42% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ribosome-binding factor a	protein	108	42% helix, 17% strand	P0A7G2

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	58	0.63	0.92	15	empty

Compared structures

1KKG · NMR Structure of Ribosome-Binding Factor A (RbfA) · the same entry in another collection · chain A against A, TM-score 1.00
P0A7G2 · AlphaFold monomer V2.0 prediction for 30S ribosome-binding factor (P0A7G2) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A7G2
Elsewhere: RCSB PDB 1KKG · PDBe 1KKG · UniProt P0A7G2

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